Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015841772.1_cds_XP_016508086.1_21147
CDS Infomation

[gene=LOC107825709] [db_xref=GeneID:107825709] [protein=protein kinase PINOID 2-like] [protein_id=XP_016508086.1] [location=complement(join(147768..148621,149019..149273,149665..150037))] [gbkey=CDS]
Sequence

ATGGCCACCACCAAAATCCAAGACGAATCCGACAAAGAAAGCACCACTTCTTCTTCACTA
ACAATGGCGGAAAATTCTACTCCTCGGAGTTGGATGAGTAGTACTACAAATCTCAGCTTC
AGCAGCAGTCGTCGGACCTCCATTTCTACAGAAACTCCATATAATTTCTCCAACTCTCAC
AAACCCCACAAGTCAAATCAAATCCCTTGGGAACTCATTAAAAAACTCCGAGTCAAAACA
GGTCAAATCAAACTCGAACATTTCCGACTTCTCCGCCGTGTAGGTGGCGGAGACATCGGA
AATGTTTACGTATGTGAAATTAGAAACCCTATTGTAATCAGTAATTGGCCAGAAAATTAC
ACTATGTCGCGAGGGTTGCTGCCGCAGTGTTTTTATGCAATGAAAGTTGTGGATAAAGAA
GCGCTAATAATAAGGAAAAAATTGCAGAGAGCAGAAATGGAGAAGGAAATATTGGGAATA
ATTGATCATCCATTTTTGCCAACTTTATATGCTCAGTTTGAAGCTTCGCATTATTCTTGT
TTGGTTATGGAGTATTGTCCAGGTGGTGATTTGCATGCCGCCCGGCAACGGCAACCGGGA
AAAAGATTCAGTATTTCCTCTGCTAAGTCGTTCATGCATTTGACAAGTTCTTTTCTTNTT
TTAGCACTAGAATATCTCCACATGATGGGAATAGTATACAGAGATCTAAAGCCAGAAAAT
GTTTTAGTAAGAGCAGATGGTCACATTATGCTTTCAGATTTTGATCTTTCTTTCAAATGT
GAAGTCATTCCAACACTTATAAAATCCAAACCTAAACCAAATGACCAAAAAAACACAAGT
TGCATCTCAAAACATTCTTATTGTTCTCTCCCTATTCAACCAGTTTTATCTTGTTTCTTA
TCACCAAAAATAGAACAAAAAAAAGTTGAAATTCAAGATCATAATTCAGAAATTGTTGCT
GAACCTATAAATGCGCGATCGCGATCGTTCGTTGGTACACATGAATATTTAGCTCCGGAG
GTAATTTCTGGACAAGGACATGGAAGTGCAGTAGATTGGTGGACATTAGGAGTTTTTTTA
TATGAACTTATTTTTGGTACTACACCTTTTAAAGGAGAAAACAATGAGAAAACTTTGGTC
AATATTTTGAAAAAATCATTGACTTTTCCAAGAATTGGGATAAGTAGTACTAGTAAAGAG
TATGAAGAAATGGTGAAAGTTCAAGATTTGATTAGTAGATTATTAGTGAAAAATCCAAAG
AAGAGAATTGGAAGTTTAAAGGGGTCAGTTGAGATTAAGAGGCATGATTTTTTTAAAGGT
GTAAATTGGGCTTTAATTAGGTCAATTAAGCCACCAGAAATTCCAAGTGATCATTTGGTG
AAATTGAAGAGTGCTAGAAATGCTGCTGCTGTTATTCCAAAGTTGAGCAAGAAACAAAGA
GAAGAACCTTATCAGATTCCTCAGTATTTTGATTACTTTTAA

Peptide Sequence

PEP ID

XP_016508086.1
PEP Infomation

PREDICTED: protein kinase PINOID 2-like [Nicotiana tabacum]
Sequence

MATTKIQDESDKESTTSSSLTMAENSTPRSWMSSTTNLSFSSSRRTSISTETPYNFSNSH
KPHKSNQIPWELIKKLRVKTGQIKLEHFRLLRRVGGGDIGNVYVCEIRNPIVISNWPENY
TMSRGLLPQCFYAMKVVDKEALIIRKKLQRAEMEKEILGIIDHPFLPTLYAQFEASHYSC
LVMEYCPGGDLHAARQRQPGKRFSISSAKSFMHLTSSFLXLALEYLHMMGIVYRDLKPEN
VLVRADGHIMLSDFDLSFKCEVIPTLIKSKPKPNDQKNTSCISKHSYCSLPIQPVLSCFL
SPKIEQKKVEIQDHNSEIVAEPINARSRSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFL
YELIFGTTPFKGENNEKTLVNILKKSLTFPRIGISSTSKEYEEMVKVQDLISRLLVKNPK
KRIGSLKGSVEIKRHDFFKGVNWALIRSIKPPEIPSDHLVKLKSARNAAAVIPKLSKKQR
EEPYQIPQYFDYF

Transcript Sequence

Gene sequence data has not been registered.